EE 145B / BioE 165
Imaging, Image Reconstruction, Processing, and Analysis
Spring 2002
182 Dwinelle; Tues and Thurs 11-12:30
Announcements
5/7 Reminder: Final exam is Wed, May 22nd 8-11am in 6 Evans Hall.
4/22 See image loading instructions for homework 6. Please turn in Homework 6 to Duan before May.
4/2 Homework 5 due date moved to Tuesday, April 9.
4/2 Joey’s office hours have changed. See below.
3/16 In order to help you prepare for the midterm, Joey’s office hours will be different this week. Instead of Wed and Fri, I will be holding two hours on Tuesday: 10-11am right outside the Free Speech Mvmt Cafe / Moffitt Library (so we’re closer to our classroom – let me know if you’re unsure of where to meet), and also 1:30-2:30pm in 469 Cory. I believe Duan will be holding hours on Monday – contact him for details.
2/22 The midterm date has changed to Thursday, March 21 in class.
1/29 Lecture is now in 182 Dwinelle, still Tues and Thurs 11-12:30.
1/22 Discussion section time has been changed to 12:00-1:00pm on Fridays in Cory 299.
Homework
Homework #7
- Due date: Thursday, April 25 in class
- Iinhomhead_kspace.mat
- Due date: May 1
- To open the following images in matlab, use these instructions
- E19642S005_V0.int2
- E19642S005_V1.int2
- E19642S005_V2.int2
- E19642S005_V3.int2
- E19642S005_V4.int2
- E19642S005_V5.int2
- E19642S005_V6.int2
- Due date: Tuesday, April 9 in class.
- tif image
- Due date: Thursday, March 14 in class.
- No need to do problem #1 since it was covered in HW #2
- Change the cross dimensions to 15x15 instead of 10x10 since you can’t make a 1/2 pixel.
- The matlab functions “radon” and “iradon” are not allowed in this homework.
- Due date: Thursday, February 7 in class.
- Due date: Thursday, January 31 in class.
- Fox images
- fox.jpg
- fox+noise1.jpg
- fox+noise2.jpg
Lectures
3/14 MR spatial localization lecture in ppt. 3/14 Lecture #7 in pps. 3/14 Lecture #6 in pps. 3/14 Lecture #5 in pps. 2/2 Lectures #3 and #4 in ppt. 1/22 Lecture #1 notes in ppt and pdf.
Discussion section material
- From discussion on 3/8/02
- (Spiral) CT lecture (fill-in-the-blanks)
- Suggested answers
- Nuclear medicine questions from discussion on 2/22/02
- Ultrasound questions from discussion on 2/15/02
- Plots showing some differences and similarities between adding cosines and multiplying them. (2/15/02)
- Ultrasound intro exercises from 2/8/02
- Filter exercises from discussion section on 2/1/02
Supplementary material
Matlab-related information
- Matlab primer by Kermit Sigmon of the University of Florida
- Matlab documentation
- Octave, a free software program similar in syntax to Matlab.
- Octave documentation
Instructors
Professor Sharmila Majumdar
- (415) 476-6830
- Sharmila.Majumdar@radiology.ucsf.edu
Professor David Saloner
- (415) 750-2238
- David.Saloner@radiology.ucsf.edu
GSI Joey Kimdon
- Office hour: (in 469 Cory)
- Fri 11-12pm
- jkimdon@eecs.berkeley.edu
GSI Duan Xu
- Office hours by appointment.
- duan@mrsc.ucsf.edu
Syllabus
| Taught by Sharmila Majumdar | |
|---|---|
| Taught by David Saloner | |
| 1/22 | Introduction to Imaging |
| 1/24 | Fourier Transforms in 1D, 2D |
| 1/29 | Implementation of the FFT, convolution |
| 1/31 | Filters |
| 2/5 | Ultrasound introduction |
| 2/7 | Quiz |
| 2/12 | Ultrasound applications |
| 2/14 | Ultrasound completed; Nuclear medicine introduced |
| 2/19 | Nuclear medicine, SPECT |
| 2/22 | Positron Emission Tomography |
| 2/26 | Computed Tomography |
| 2/28 | CT continued |
| 3/5 | CT reconstruction, Radon Transform |
| 3/7 | Spiral CT |
| 3/12 | CT image analysis |
| 3/14 | Magnetic Resonance |
| 3/19 | MR hardware basics |
| 3/21 | Midterm new date |
| 3/25-29 | Spring Break |
| 4/2 | Contrast and relaxation mechanizms |
| 4/4 | Image analysis, relaxation maps |
| 4/9 | Spatial Encoding |
| 4/11 | Pulse sequences |
| 4/16 | FT reconstruction |
| 4/18 | FT recon, RF design |
| 4/23 | Parametric imaging, flow |
| 4/25 | Contrast agents |
| 4/30 | Angiography |
| 5/2 | Applications |
| 5/7 | Review |
| 5/9 | Review |
| 5/14 | Last day of classes |